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LOC105008238 sister chromatid cohesion protein PDS5 homolog B [ Esox lucius (northern pike) ]

Gene ID: 105008238, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105008238
Gene description
sister chromatid cohesion protein PDS5 homolog B
See related
EnsemblRapid:ENSELUG00000007519
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
APRIN; pds5b
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Genomic context

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See LOC105008238 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
35
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (41303429..41341638, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (9765748..9804077)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene GTPase IMAP family member 8 Neighboring gene klotho Neighboring gene furry homolog b (Drosophila) Neighboring gene zygote arrest 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sister chromatid cohesion protein PDS5 homolog B
Names
Androgen-induced proliferation inhibitor
PDS5 cohesin associated factor B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    41303429..41341638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029121286.2 → XP_028977119.1  sister chromatid cohesion protein PDS5 homolog B

    UniProtKB/TrEMBL
    A0A6Q2X5L4, A0A6Q2YJP0
    Related
    ENSELUP00000066918.2, ENSELUT00000081948.2
    Conserved Domains (3) summary
    PTZ00449
    Location:1042 → 1272
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    PRK05667
    Location:250 → 457
    dnaG; DNA primase; Validated
    sd00044
    Location:239 → 261
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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