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Asb11 ankyrin repeat and SOCS box containing 11 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103740294, updated on 11-Mar-2024

Summary

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Gene symbol
Asb11
Gene description
ankyrin repeat and SOCS box containing 11
See related
Ensembl:ENSNGAG00000000940
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008344634.1 (486246..518070)

NW_008344634.1Genomic Context describing neighboring genes Neighboring gene vascular endothelial growth factor D Neighboring gene phosphatidylinositol glycan anchor biosynthesis class A Neighboring gene ATP synthase membrane subunit DAPIT, mitochondrial pseudogene Neighboring gene ankyrin repeat and SOCS box containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008344634 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008344634.1 Reference S.galili_v1.0 Primary Assembly

    Range
    486246..518070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008840883.2 → XP_008839105.1  ankyrin repeat and SOCS box protein 11

    UniProtKB/TrEMBL
    A0A8C6QCK6, A0A8C6QCY4
    Related
    ENSNGAP00000001270.1, ENSNGAT00000001289.1
    Conserved Domains (3) summary
    sd00045
    Location:66 → 95
    ANK; ANK repeat [structural motif]
    cl02533
    Location:282 → 323
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
    cl39094
    Location:39 → 281
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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