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Aebp1 AE binding protein 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103734980, updated on 11-Mar-2024

Summary

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Gene symbol
Aebp1
Gene description
AE binding protein 1
See related
Ensembl:ENSNGAG00000021547
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008339436.1 (619535..629810)

NW_008339436.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase mu Neighboring gene proteasome subunit beta type-6 pseudogene Neighboring gene DNA polymerase delta 2, accessory subunit Neighboring gene myosin light chain 7 Neighboring gene glucokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008339436 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adipocyte enhancer-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008339436.1 Reference S.galili_v1.0 Primary Assembly

    Range
    619535..629810
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008834064.3 → XP_008832286.1  adipocyte enhancer-binding protein 1

    UniProtKB/TrEMBL
    A0A8C6RTS9, A0A8C6RU25
    Related
    ENSNGAP00000022782.1, ENSNGAT00000028471.1
    Conserved Domains (3) summary
    cd11308
    Location:899 → 974
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cd00057
    Location:378 → 531
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl11393
    Location:556 → 895
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein
Heading Accession and Version

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