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agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103185181, updated on 11-Mar-2024

Summary

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Gene symbol
agpat3
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 3
See related
Ensembl:ENSCMIG00000017972
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704745.1 (7038504..7058888, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890163.1 (894987..905713)

NW_024704745.1Genomic Context describing neighboring genes Neighboring gene periodic tryptophan protein 2 homolog Neighboring gene PWP2 small subunit processome component Neighboring gene pyridoxal (pyridoxine, vitamin B6) kinase a Neighboring gene fibroblast growth factor 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Names
1-acyl-sn-glycerol-3-phosphate acyltransferase gamma-like protein
NP_001279132.1
XP_042189758.1
XP_042189759.1
XP_042189760.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001292203.1 → NP_001279132.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma

    See identical proteins and their annotated locations for NP_001279132.1

    Status: PROVISIONAL

    Source sequence(s)
    JX212042
    UniProtKB/TrEMBL
    K4G8L9, K4GCC8
    Conserved Domains (1) summary
    PLN02380
    Location:12 → 325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704745.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    7038504..7058888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042333825.1 → XP_042189759.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    UniProtKB/TrEMBL
    K4G8L9, K4GCC8
    Conserved Domains (1) summary
    PLN02380
    Location:12 → 325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

  2. XM_042333826.1 → XP_042189760.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    UniProtKB/TrEMBL
    K4G8L9, K4GCC8
    Conserved Domains (1) summary
    PLN02380
    Location:12 → 325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

  3. XM_042333824.1 → XP_042189758.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    UniProtKB/TrEMBL
    K4G8L9, K4GCC8
    Conserved Domains (1) summary
    PLN02380
    Location:12 → 325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Nucleotide Protein
Heading Accession and Version

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