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pdxka pyridoxal (pyridoxine, vitamin B6) kinase a [ Callorhinchus milii (elephant shark) ]

Gene ID: 103185180, updated on 7-Dec-2023

Summary

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Gene symbol
pdxka
Gene description
pyridoxal (pyridoxine, vitamin B6) kinase a
See related
Ensembl:ENSCMIG00000017870
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
pdxk
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Genomic context

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See pdxka in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704745.1 (7075295..7084313, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890163.1 (839748..846128)

NW_024704745.1Genomic Context describing neighboring genes Neighboring gene PWP2 small subunit processome component Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 3 Neighboring gene ribosomal RNA processing protein 1 homolog B-like Neighboring gene fibroblast growth factor 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyridoxal 5'-phosphate salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyridoxal kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704745.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    7075295..7084313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042334020.1 → XP_042189954.1  pyridoxal kinase

    UniProtKB/TrEMBL
    V9L5X0
    Conserved Domains (1) summary
    cl00192
    Location:62 → 345
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...
Nucleotide Protein
Heading Accession and Version

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