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appbp2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103180648, updated on 11-Mar-2024

Summary

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Gene symbol
appbp2
Gene description
amyloid beta precursor protein (cytoplasmic tail) binding protein 2
See related
Ensembl:ENSCMIG00000018004
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704751.1 (6849147..6871222)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890100.1 (4419221..4441634, complement)

NW_024704751.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103180650 Neighboring gene protein ABHD15 Neighboring gene uncharacterized si:ch1073-145m9.1 Neighboring gene uncharacterized LOC121849781

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid protein-binding protein 2
Names
amyloid beta precursor protein binding protein 2
amyloid protein-binding protein 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704751.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    6849147..6871222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007896625.2 → XP_007894816.1  amyloid protein-binding protein 2

    See identical proteins and their annotated locations for XP_007894816.1

    UniProtKB/TrEMBL
    A0A4W3JJ37, V9KCF8
    Related
    ENSCMIP00000043451.1
    Conserved Domains (3) summary
    sd00006
    Location:429 → 457
    TPR; TPR repeat [structural motif]
    pfam13374
    Location:428 → 466
    TPR_10; Tetratricopeptide repeat
    pfam13424
    Location:427 → 504
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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