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ankrd55 ankyrin repeat domain 55 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103177872, updated on 11-Mar-2024

Summary

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Gene symbol
ankrd55
Gene description
ankyrin repeat domain 55
See related
Ensembl:ENSCMIG00000019334
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704742.1 (123244385..123278530)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890075.1 (5249974..5285507)

NW_024704742.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 9 Neighboring gene mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase Neighboring gene interleukin 6 cytokine family signal transduce Neighboring gene interleukin-6 receptor subunit beta-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 55
Names
ankyrin repeat domain-containing protein 55-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704742.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    123244385..123278530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007892238.2 → XP_007890429.1  ankyrin repeat domain-containing protein 55

    UniProtKB/TrEMBL
    A0A4W3K5L2
    Related
    ENSCMIP00000047126.1
    Conserved Domains (6) summary
    smart00248
    Location:54 → 82
    ANK; ankyrin repeats
    cd00204
    Location:150 → 279
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:92 → 186
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:260 → 311
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:175 → 232
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:88 → 118
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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