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ASCC2 activating signal cointegrator 1 complex subunit 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102944916, updated on 10-Mar-2024

Summary

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Gene symbol
ASCC2
Gene description
activating signal cointegrator 1 complex subunit 2
Locus tag
UY3_15274
See related
EnsemblRapid:ENSCMYG00015008684
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 15 NC_057856.1 (1233788..1280491)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 15 NC_051255.1 (1233760..1280491)

Chromosome 15 - NC_057856.1Genomic Context describing neighboring genes Neighboring gene HORMA domain-containing protein 2-like Neighboring gene myotubularin related protein 3 Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene zinc finger matrin-type 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activating signal cointegrator 1 complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057856.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    1233788..1280491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037878636.2 → XP_037734564.1  activating signal cointegrator 1 complex subunit 2 isoform X2

    Conserved Domains (1) summary
    cd14364
    Location:444 → 483
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  2. XM_043529944.1 → XP_043385879.1  activating signal cointegrator 1 complex subunit 2 isoform X3

    Conserved Domains (1) summary
    cd14364
    Location:431 → 470
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  3. XM_037878633.2 → XP_037734561.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  4. XM_043529939.1 → XP_043385874.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  5. XM_037878631.2 → XP_037734559.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  6. XM_037878628.2 → XP_037734556.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  7. XM_043529943.1 → XP_043385878.1  activating signal cointegrator 1 complex subunit 2 isoform X3

    Conserved Domains (1) summary
    cd14364
    Location:431 → 470
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  8. XM_037878629.2 → XP_037734557.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  9. XM_037878634.2 → XP_037734562.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  10. XM_043529940.1 → XP_043385875.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  11. XM_043529938.1 → XP_043385873.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  12. XM_043529941.1 → XP_043385876.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  13. XM_037878635.1 → XP_037734563.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

  14. XM_043529942.1 → XP_043385877.1  activating signal cointegrator 1 complex subunit 2 isoform X1

    Related
    ENSCMYP00015013381.1, ENSCMYT00015016249.1
    Conserved Domains (1) summary
    cd14364
    Location:467 → 506
    CUE_ASCC2; CUE domain found in activating signal cointegrator 1 complex subunit 2 (ASCC2) and similar proteins

RNA

  1. XR_005222362.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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