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ABCB1 ATP binding cassette subfamily B member 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941294, updated on 10-Mar-2024

Summary

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Gene symbol
ABCB1
Gene description
ATP binding cassette subfamily B member 1
Locus tag
UY3_16388
See related
EnsemblRapid:ENSCMYG00015024869
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
32
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (220618538..220704064)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (220636071..220701878)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 40 Neighboring gene RUN domain containing 3B Neighboring gene uncharacterized LOC122464741 Neighboring gene carnitine O-octanoyltransferase Neighboring gene uncharacterized LOC122464742 Neighboring gene oleoyl-ACP hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent translocase ABCB1
Names
Multidrug resistance protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    220618538..220704064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007069599.4 → XP_007069661.2  ATP-dependent translocase ABCB1 isoform X1

    UniProtKB/TrEMBL
    M7AU83
    Related
    ENSCMYP00015037994.1, ENSCMYT00015046770.1
    Conserved Domains (1) summary
    PTZ00265
    Location:9 → 1275
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  2. XM_043541262.1 → XP_043397197.1  ATP-dependent translocase ABCB1 isoform X1

    UniProtKB/TrEMBL
    M7AU83
    Conserved Domains (1) summary
    PTZ00265
    Location:9 → 1275
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  3. XM_043541263.1 → XP_043397198.1  ATP-dependent translocase ABCB1 isoform X1

    UniProtKB/TrEMBL
    M7AU83
    Conserved Domains (1) summary
    PTZ00265
    Location:9 → 1275
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  4. XM_037890755.2 → XP_037746683.1  ATP-dependent translocase ABCB1 isoform X2

    Conserved Domains (3) summary
    cd03249
    Location:402 → 638
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    cd18558
    Location:69 → 374
    ABC_6TM_Pgp_ABCB1; Six-transmembrane helical domain of P-glycoprotein 1 (Pgp) and related proteins
    cd18578
    Location:704 → 829
    ABC_6TM_Pgp_ABCB1_D2_like; Six-transmembrane helical domain 2 (TMD2) of P-glycoprotein 1 (Pgp) and related proteins
Nucleotide Protein
Heading Accession and Version

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