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MARCHF9 membrane associated ring-CH-type finger 9 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102575219, updated on 10-Mar-2024

Summary

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Gene symbol
MARCHF9
Gene description
membrane associated ring-CH-type finger 9
Locus tag
Y1Q_0009483
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
MARCH9
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 15 NC_081838.1 (7492620..7498922)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713857.1 (23788..29721)

Chromosome 15 - NC_081838.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 31 Neighboring gene cyclin dependent kinase 4 Neighboring gene 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial Neighboring gene methyltransferase 1, tRNA methylguanosine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCHF9
Names
E3 ubiquitin-protein ligase MARCH9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081838.1 Reference rAllMis1 Primary Assembly

    Range
    7492620..7498922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014602979.3 → XP_014458465.1  E3 ubiquitin-protein ligase MARCHF9

    UniProtKB/TrEMBL
    A0A151M653
    Conserved Domains (1) summary
    smart00744
    Location:98 → 144
    RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins
Nucleotide Protein
Heading Accession and Version

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