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ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 [ Capra hircus (goat) ]

Gene ID: 102172097, updated on 10-Mar-2024

Summary

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Gene symbol
ADAMTS5
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 5
See related
EnsemblRapid:ENSCHIG00000018986
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 1 NC_030808.1 (7818403..7871968)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 1 NC_022293.1 (8661654..8716749)

Chromosome 1 - NC_030808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106503681 Neighboring gene uncharacterized LOC108636748 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 1 Neighboring gene cysteine and tyrosine rich 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Liaoning cashmere goat transcriptome: sequencing, de novo assembly, functional annotation and comparative analysis. Liu H, et al. PLoS One, 2013. PMID 24130835, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030808.1 Reference ASM170441v1 Primary Assembly

    Range
    7818403..7871968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013965221.2 → XP_013820675.2  A disintegrin and metalloproteinase with thrombospondin motifs 5

    UniProtKB/TrEMBL
    A0A452F7Q5, A0A452F813
    Related
    ENSCHIP00000020287.2, ENSCHIT00000028120.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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