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ATF2 activating transcription factor 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925838, updated on 3-Apr-2024

Summary

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Gene symbol
ATF2
Gene description
activating transcription factor 2
See related
Ensembl:ENSMFAG00000002278
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ATF2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 12 NC_052266.1 (59913857..60004448, complement)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 12 NC_022283.1 (64052523..64139468, complement)

Chromosome 12 - NC_052266.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L21-like Neighboring gene uncharacterized LOC107126913 Neighboring gene U6 spliceosomal RNA Neighboring gene ATP synthase membrane subunit c locus 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
  2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cAMP response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-2
XP_045223223.1
XP_045223224.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052266.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    59913857..60004448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045367288.1 → XP_045223223.1  cyclic AMP-dependent transcription factor ATF-2 isoform X1

    UniProtKB/TrEMBL
    A0A2K5U075, A0A8J8XU04, G7PKV5
    Conserved Domains (4) summary
    cd12192
    Location:65 → 102
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    cd14687
    Location:354 → 414
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    sd00019
    Location:27 → 49
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam05109
    Location:90 → 342
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_045367289.1 → XP_045223224.1  cyclic AMP-dependent transcription factor ATF-2 isoform X2

    UniProtKB/TrEMBL
    A0A2K5U087
    Conserved Domains (4) summary
    cd12192
    Location:65 → 102
    GCN4_cent; GCN4 central activation domain-like acidic activation domain
    cd14687
    Location:354 → 414
    bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    sd00019
    Location:27 → 49
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam05109
    Location:90 → 342
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

RNA

  1. XR_006691075.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001285028.1: Suppressed sequence

    Description
    NM_001285028.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version

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