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Aebp1 AE binding protein 1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101839092, updated on 8-Mar-2024

Summary

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Gene symbol
Aebp1
Gene description
AE binding protein 1
See related
EnsemblRapid:ENSMAUG00000003120
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429190.1 (10164531..10174786, complement)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801842.1 (351323..361371)

NW_024429190.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 7 Neighboring gene DNA polymerase delta 2, accessory subunit Neighboring gene uncharacterized LOC121140761 Neighboring gene DNA polymerase mu

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adipocyte enhancer-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429190.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    10164531..10174786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040746740.1 → XP_040602674.1  adipocyte enhancer-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0CF57
    Related
    ENSMAUP00000033817.1, ENSMAUT00000037726.1
    Conserved Domains (3) summary
    cd11308
    Location:898 → 973
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cd00057
    Location:377 → 530
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl11393
    Location:555 → 894
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  2. XM_040746738.1 → XP_040602672.1  adipocyte enhancer-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0CF57
    Related
    ENSMAUP00000037342.1, ENSMAUT00000079604.1
    Conserved Domains (3) summary
    cd11308
    Location:922 → 997
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cd00057
    Location:401 → 554
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl11393
    Location:579 → 918
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  3. XM_040746739.1 → XP_040602673.1  adipocyte enhancer-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0CF57
    Related
    ENSMAUP00000003075.2, ENSMAUT00000004027.2
    Conserved Domains (3) summary
    cd11308
    Location:910 → 985
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cd00057
    Location:389 → 542
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cl11393
    Location:567 → 906
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein Strain
Heading Accession and Version

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