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Atp6v1c1 ATPase H+ transporting V1 subunit C1 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101831576, updated on 8-Mar-2024

Summary

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Gene symbol
Atp6v1c1
Gene description
ATPase H+ transporting V1 subunit C1
See related
EnsemblRapid:ENSMAUG00000036250
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429204.1 (4696154..4728846)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801638.1 (12843338..12876126, complement)

NW_024429204.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121133694 Neighboring gene uncharacterized LOC110341359 Neighboring gene uncharacterized LOC121133724 Neighboring gene uncharacterized LOC110341358 Neighboring gene uncharacterized LOC121133677

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429204.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    4696154..4728846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040730362.1 → XP_040586296.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A3Q0CUT6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_040730361.1 → XP_040586295.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A3Q0CUT6
    Related
    ENSMAUP00000034781.1, ENSMAUT00000071818.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein Strain
Heading Accession and Version

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