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Ankrd54 ankyrin repeat domain 54 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101828251, updated on 8-Mar-2024

Summary

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Gene symbol
Ankrd54
Gene description
ankyrin repeat domain 54
See related
EnsemblRapid:ENSMAUG00000019774
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429194.1 (85750299..85761288)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801613.1 (1349437..1360458, complement)

NW_024429194.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121142944 Neighboring gene MICAL like 1 Neighboring gene eukaryotic translation initiation factor 3 subunit L Neighboring gene galanin receptor 3 Neighboring gene glycine C-acetyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat domain-containing protein 54

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429194.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    85750299..85761288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005066974.4 → XP_005067031.1  ankyrin repeat domain-containing protein 54

    UniProtKB/TrEMBL
    A0A1U7QIV7
    Related
    ENSMAUP00000022293.1, ENSMAUT00000026291.2
    Conserved Domains (3) summary
    cd00204
    Location:117 → 231
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:117 → 205
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:141 → 172
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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