U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Vrk3 VRK serine/threonine kinase 3 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101828238, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Vrk3
Gene description
VRK serine/threonine kinase 3
See related
EnsemblRapid:ENSMAUG00000015093
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Vrk3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429231.1 (1619654..1647967)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801779.1 (2098359..2126671, complement)

NW_024429231.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain 14 Neighboring gene IZUMO family member 2 Neighboring gene zinc finger protein 473 Neighboring gene activating transcription factor 5 Neighboring gene nucleoporin 62 Neighboring gene interleukin 4 induced 1 Neighboring gene TBC1 domain family member 17

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
inactive serine/threonine-protein kinase VRK3
Names
vaccinia related kinase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429231.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    1619654..1647967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040735993.1 → XP_040591927.1  inactive serine/threonine-protein kinase VRK3 isoform X3

    Conserved Domains (1) summary
    cl21453
    Location:131 → 342
    PKc_like; Protein Kinases, catalytic domain

  2. XM_040735994.1 → XP_040591928.1  inactive serine/threonine-protein kinase VRK3 isoform X4

    Related
    ENSMAUP00000015711.2, ENSMAUT00000019640.2
    Conserved Domains (1) summary
    cl21453
    Location:131 → 342
    PKc_like; Protein Kinases, catalytic domain

  3. XM_040735995.1 → XP_040591929.1  inactive serine/threonine-protein kinase VRK3 isoform X5

    Conserved Domains (1) summary
    cl21453
    Location:131 → 297
    PKc_like; Protein Kinases, catalytic domain

  4. XM_013124227.3 → XP_012979681.1  inactive serine/threonine-protein kinase VRK3 isoform X2

    UniProtKB/TrEMBL
    A0A1U8CJN2
    Related
    ENSMAUP00000049006.1, ENSMAUT00000059331.1
    Conserved Domains (4) summary
    COG0515
    Location:217 → 390
    SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
    pfam12773
    Location:5 → 23
    DZR; Double zinc ribbon
    pfam13240
    Location:4 → 26
    zinc_ribbon_2; zinc-ribbon domain
    cl21453
    Location:131 → 401
    PKc_like; Protein Kinases, catalytic domain

  5. XM_013124223.3 → XP_012979677.1  inactive serine/threonine-protein kinase VRK3 isoform X1

    See identical proteins and their annotated locations for XP_012979677.1

    UniProtKB/TrEMBL
    A0A1U8CJW2
    Related
    ENSMAUP00000037840.1, ENSMAUT00000067044.1
    Conserved Domains (4) summary
    COG0515
    Location:217 → 446
    SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
    pfam12773
    Location:5 → 23
    DZR; Double zinc ribbon
    pfam13240
    Location:4 → 26
    zinc_ribbon_2; zinc-ribbon domain
    cl21453
    Location:131 → 433
    PKc_like; Protein Kinases, catalytic domain

  6. XM_013124224.3 → XP_012979678.1  inactive serine/threonine-protein kinase VRK3 isoform X1

    See identical proteins and their annotated locations for XP_012979678.1

    UniProtKB/TrEMBL
    A0A1U8CJW2
    Related
    ENSMAUP00000052371.1, ENSMAUT00000079112.1
    Conserved Domains (4) summary
    COG0515
    Location:217 → 446
    SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
    pfam12773
    Location:5 → 23
    DZR; Double zinc ribbon
    pfam13240
    Location:4 → 26
    zinc_ribbon_2; zinc-ribbon domain
    cl21453
    Location:131 → 433
    PKc_like; Protein Kinases, catalytic domain

RNA

  1. XR_005873301.1 RNA Sequence

  2. XR_002385977.2 RNA Sequence

  3. XR_005873300.1 RNA Sequence

  4. XR_002385978.2 RNA Sequence

  5. XR_001197392.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.