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Afp alpha fetoprotein [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101725205, updated on 8-Mar-2024

Summary

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Gene symbol
Afp
Gene description
alpha fetoprotein
Locus tag
GW7_11086
See related
Ensembl:ENSHGLG00000011251
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624735.1 (34072257..34092540, complement)

NW_004624735.1Genomic Context describing neighboring genes Neighboring gene RAC-gamma serine/threonine-protein kinase pseudogene Neighboring gene acyl-CoA:lysophosphatidylglycerol acyltransferase 1 pseudogene Neighboring gene afamin Neighboring gene uncharacterized LOC110347553 Neighboring gene albumin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624735 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-fetoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624735.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    34072257..34092540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004838012.2 → XP_004838069.1  alpha-fetoprotein

    UniProtKB/TrEMBL
    A0A0P6IWC1, G5B5P1
    Related
    ENSHGLP00000015726.1, ENSHGLT00000015891.1
    Conserved Domains (1) summary
    pfam00273
    Location:222 → 393
    Serum_albumin; Serum albumin family
Nucleotide Protein
Heading Accession and Version

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