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Atxn7 ataxin 7 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101703612, updated on 8-Mar-2024

Summary

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Gene symbol
Atxn7
Gene description
ataxin 7
Locus tag
GW7_07767
See related
Ensembl:ENSHGLG00000008211
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Ataxin-7
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624888.1 (1910385..2045038, complement)

NW_004624888.1Genomic Context describing neighboring genes Neighboring gene prickle planar cell polarity protein 2 Neighboring gene proteasome 26S subunit, non-ATPase 6 Neighboring gene putative uncharacterized protein C3orf49 Neighboring gene cadherin-related family member 3 Neighboring gene THO complex subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624888 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ataxin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624888.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1910385..2045038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021249648.1 → XP_021105307.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    G5C228
    Conserved Domains (2) summary
    pfam08313
    Location:301 → 360
    SCA7; zinc-binding domain
    cl26464
    Location:375 → 661
    Atrophin-1; Atrophin-1 family

  2. XM_021249647.1 → XP_021105306.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    G5C228
    Conserved Domains (2) summary
    pfam08313
    Location:301 → 360
    SCA7; zinc-binding domain
    cl26464
    Location:375 → 661
    Atrophin-1; Atrophin-1 family

  3. XM_004871607.3 → XP_004871664.1  ataxin-7 isoform X2

    See identical proteins and their annotated locations for XP_004871664.1

    UniProtKB/TrEMBL
    G5C228
    Related
    ENSHGLP00000011451.1, ENSHGLT00000011578.1
    Conserved Domains (1) summary
    pfam08313
    Location:295 → 360
    SCA7; SCA7, zinc-binding domain

  4. XM_013068087.2 → XP_012923541.2  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    G5C228
    Conserved Domains (2) summary
    pfam08313
    Location:301 → 360
    SCA7; zinc-binding domain
    cl26464
    Location:375 → 661
    Atrophin-1; Atrophin-1 family

  5. XM_013068091.2 → XP_012923545.1  ataxin-7 isoform X3

    UniProtKB/TrEMBL
    G5C228
    Related
    ENSHGLP00000011452.1, ENSHGLT00000011579.1
    Conserved Domains (1) summary
    pfam08313
    Location:182 → 247
    SCA7; SCA7, zinc-binding domain
Nucleotide Protein
Heading Accession and Version

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