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ABTB1 ankyrin repeat and BTB domain containing 1 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101690967, updated on 8-Mar-2024

Summary

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Gene symbol
ABTB1
Gene description
ankyrin repeat and BTB domain containing 1
See related
Ensembl:ENSMPUG00000017345
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422002.1 (17007179..17014896, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569143.1 (39570857..39578511, complement)

NW_025422002.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L12-like Neighboring gene kelch repeat and BTB domain containing 12 Neighboring gene monoglyceride lipase Neighboring gene podocalyxin like 2 Neighboring gene minichromosome maintenance complex component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  3. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and BTB/POZ domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422002.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    17007179..17014896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013055225.2 → XP_012910679.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8U0NSH1
    Conserved Domains (5) summary
    sd00045
    Location:35 → 66
    ANK; ANK repeat [structural motif]
    cd18296
    Location:215 → 338
    BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18497
    Location:337 → 408
    BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cl38908
    Location:97 → 175
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam12796
    Location:6 → 65
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_004738651.3 → XP_004738708.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    M3Z0X3
    Related
    ENSMPUP00000017235.1
    Conserved Domains (5) summary
    sd00045
    Location:35 → 66
    ANK; ANK repeat [structural motif]
    cd18295
    Location:97 → 214
    BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18296
    Location:254 → 377
    BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18497
    Location:376 → 447
    BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    pfam12796
    Location:6 → 65
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_004738653.3 → XP_004738710.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8U0ME65
    Conserved Domains (3) summary
    cd18295
    Location:72 → 189
    BTB1_POZ_ABTB1_BPOZ1; first BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18296
    Location:229 → 352
    BTB2_POZ_ABTB1_BPOZ1; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)
    cd18497
    Location:351 → 422
    BACK_ABTB1_BPOZ; BACK (BTB and C-terminal Kelch) domain found in ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1)

  4. XM_013055228.2 → XP_012910682.1  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8U0NRL4
    Conserved Domains (2) summary
    smart00225
    Location:229 → 332
    BTB; Broad-Complex, Tramtrack and Bric a brac
    pfam00651
    Location:229 → 328
    BTB; BTB/POZ domain
Nucleotide Protein
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