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ADAMTSL4 ADAMTS like 4 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101686084, updated on 8-Mar-2024

Summary

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Gene symbol
ADAMTSL4
Gene description
ADAMTS like 4
See related
Ensembl:ENSMPUG00000004691
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See ADAMTSL4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421447.1 (3115124..3137688, complement)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569378.1 (1581348..1631137, complement)

NW_025421447.1Genomic Context describing neighboring genes Neighboring gene endosulfine alpha Neighboring gene MCL1 apoptosis regulator, BCL2 family member Neighboring gene uncharacterized LOC123392914 Neighboring gene uncharacterized LOC123392913 Neighboring gene extracellular matrix protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421447.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    3115124..3137688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045083126.1 → XP_044939061.1  ADAMTS-like protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A8U0SBP8, M3Y003
    Conserved Domains (4) summary
    smart00209
    Location:85 → 115
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:520 → 632
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1067 → 1096
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:948 → 1004
    TSP1_ADAMTS; Thrombospondin type 1 domain

  2. XM_004776795.3 → XP_004776852.1  ADAMTS-like protein 4 isoform X5

    See identical proteins and their annotated locations for XP_004776852.1

    UniProtKB/TrEMBL
    A0A8U0SBP8, M3Y003
    Conserved Domains (4) summary
    smart00209
    Location:85 → 115
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:520 → 632
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1067 → 1096
    PLAC; PLAC (protease and lacunin) domain
    pfam19030
    Location:948 → 1004
    TSP1_ADAMTS; Thrombospondin type 1 domain

  3. XM_045083122.1 → XP_044939057.1  ADAMTS-like protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A8U0SAJ7, M3Y003
    Conserved Domains (2) summary
    smart00209
    Location:1200 → 1249
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:709 → 821
    ADAM_spacer1; ADAM-TS Spacer 1

  4. XM_045083124.1 → XP_044939059.1  ADAMTS-like protein 4 isoform X4

    UniProtKB/TrEMBL
    A0A8U0SD65, M3Y003
    Conserved Domains (2) summary
    smart00209
    Location:1130 → 1179
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:715 → 755
    ADAM_spacer1; ADAM-TS Spacer 1

  5. XM_045083123.1 → XP_044939058.1  ADAMTS-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A8U0V518, M3Y003
    Conserved Domains (2) summary
    smart00209
    Location:1206 → 1255
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:715 → 827
    ADAM_spacer1; ADAM-TS Spacer 1

  6. XM_013047941.2 → XP_012903395.2  ADAMTS-like protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A8U0T9I0, M3Y003
    Conserved Domains (2) summary
    smart00209
    Location:1206 → 1255
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:715 → 827
    ADAM_spacer1; ADAM-TS Spacer 1

  7. XM_013047942.2 → XP_012903396.1  ADAMTS-like protein 4 isoform X6

    See identical proteins and their annotated locations for XP_012903396.1

    UniProtKB/TrEMBL
    A0A8U0NLF1, M3Y003
    Conserved Domains (3) summary
    smart00209
    Location:979 → 1028
    TSP1; Thrombospondin type 1 repeats
    pfam05986
    Location:488 → 600
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1035 → 1064
    PLAC; PLAC (protease and lacunin) domain

RNA

  1. XR_006607606.1 RNA Sequence

  2. XR_006607605.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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