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ABCD3 ATP binding cassette subfamily D member 3 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101676496, updated on 11-Apr-2024

Summary

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Gene symbol
ABCD3
Gene description
ATP binding cassette subfamily D member 3
See related
Ensembl:ENSMPUG00000003362
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025422005.1 (79812900..79887982)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569177.1 (4371182..4446146, complement)

NW_025422005.1Genomic Context describing neighboring genes Neighboring gene poly(A) polymerase alpha-like Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene coagulation factor III, tissue factor Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for the domestic ferret. Bruder CE, et al. BMC Genomics, 2010 Apr 19. PMID 20403183, Free PMC Article
  2. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025422005.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    79812900..79887982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004752564.3 → XP_004752621.1  ATP-binding cassette sub-family D member 3 isoform X1

    UniProtKB/TrEMBL
    M1EFC6, M3XW80
    Related
    ENSMPUP00000003330.1
    Conserved Domains (3) summary
    cd03223
    Location:441 → 646
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    pfam06472
    Location:59 → 338
    ABC_membrane_2; ABC transporter transmembrane region 2

  2. XM_004752565.2 → XP_004752622.1  ATP-binding cassette sub-family D member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8U0SVS5, M1EFC6
    Conserved Domains (3) summary
    cd03223
    Location:368 → 573
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    COG1132
    Location:4 → 560
    MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
    pfam06472
    Location:1 → 265
    ABC_membrane_2; ABC transporter transmembrane region 2

  3. XM_045064882.1 → XP_044920817.1  ATP-binding cassette sub-family D member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8U0RAZ8, M1EFC6
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 516
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
Nucleotide Protein
Heading Accession and Version

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