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AFF2 ALF transcription elongation factor 2 [ Felis catus (domestic cat) ]

Gene ID: 101092251, updated on 8-Mar-2024

Summary

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Official Symbol
AFF2
Official Full Name
ALF transcription elongation factor 2
Primary source
VGNC:VGNC:59668
See related
EnsemblRapid:ENSFCTG00005005857
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
22
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) X NC_058386.1 (121278088..121734026)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) X NC_018741.3 (124050517..124511205)

Chromosome X - NC_058386.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene 60S ribosomal protein L31-like Neighboring gene uncharacterized LOC123383474 Neighboring gene uncharacterized protein CXorf51A-like Neighboring gene uncharacterized LOC109496640

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AF4/FMR2 family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058386.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    121278088..121734026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023249262.2 → XP_023105030.2  AF4/FMR2 family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A337SL81
    Conserved Domains (1) summary
    PRK12372
    Location:820 → 909
    PRK12372; ribonuclease III; Reviewed

  2. XM_023249264.2 → XP_023105032.2  AF4/FMR2 family member 2 isoform X3

    UniProtKB/TrEMBL
    A0A337SL81
    Conserved Domains (1) summary
    PRK12372
    Location:814 → 903
    PRK12372; ribonuclease III; Reviewed

  3. XM_023249266.2 → XP_023105034.2  AF4/FMR2 family member 2 isoform X5

    UniProtKB/TrEMBL
    M3W1L7
    Conserved Domains (1) summary
    PRK12372
    Location:791 → 880
    PRK12372; ribonuclease III; Reviewed

  4. XM_023249268.2 → XP_023105036.2  AF4/FMR2 family member 2 isoform X7

    UniProtKB/TrEMBL
    M3W1L7
    Conserved Domains (1) summary
    PRK12372
    Location:785 → 874
    PRK12372; ribonuclease III; Reviewed

  5. XM_023249263.2 → XP_023105031.2  AF4/FMR2 family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A337SL81
    Related
    ENSFCTP00005011264.1, ENSFCTT00005016443.1
    Conserved Domains (1) summary
    PRK12372
    Location:816 → 905
    PRK12372; ribonuclease III; Reviewed

  6. XM_023249265.2 → XP_023105033.2  AF4/FMR2 family member 2 isoform X4

    UniProtKB/TrEMBL
    A0A337SL81
    Related
    ENSFCTP00005011239.1, ENSFCTT00005016417.1
    Conserved Domains (1) summary
    PRK12372
    Location:810 → 899
    PRK12372; ribonuclease III; Reviewed

  7. XM_023249267.2 → XP_023105035.2  AF4/FMR2 family member 2 isoform X6

    UniProtKB/TrEMBL
    M3W1L7
    Related
    ENSFCTP00005011283.1, ENSFCTT00005016465.1
    Conserved Domains (1) summary
    PRK12372
    Location:787 → 876
    PRK12372; ribonuclease III; Reviewed

  8. XM_023249269.2 → XP_023105037.2  AF4/FMR2 family member 2 isoform X8

    UniProtKB/TrEMBL
    M3W1L7
    Related
    ENSFCTP00005011313.1, ENSFCTT00005016503.1
    Conserved Domains (1) summary
    PRK12372
    Location:781 → 870
    PRK12372; ribonuclease III; Reviewed

  9. XM_045051080.1 → XP_044907015.1  AF4/FMR2 family member 2 isoform X10

    UniProtKB/TrEMBL
    A0A5F5XHJ7
    Conserved Domains (1) summary
    PRK12372
    Location:529 → 618
    PRK12372; ribonuclease III; Reviewed

  10. XM_045051081.1 → XP_044907016.1  AF4/FMR2 family member 2 isoform X11

    Conserved Domains (1) summary
    PRK12372
    Location:500 → 589
    PRK12372; ribonuclease III; Reviewed

  11. XM_045051079.1 → XP_044907014.1  AF4/FMR2 family member 2 isoform X9

    UniProtKB/TrEMBL
    A0A337SL81
    Related
    ENSFCTP00005011223.1, ENSFCTT00005016401.1
    Conserved Domains (1) summary
    PRK12372
    Location:740 → 829
    PRK12372; ribonuclease III; Reviewed
Nucleotide Protein
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