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AMELX amelogenin X-linked [ Capra hircus (goat) ]

Gene ID: 100860759, updated on 8-Mar-2024

Summary

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Gene symbol
AMELX
Gene description
amelogenin X-linked
See related
EnsemblRapid:ENSCHIG00000017454
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Also known as
AML-X
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) X Unlocalized Scaffold NW_017189516.1 (58861148..58868852, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) X NC_022322.1 (120248191..120255898, complement)

NW_017189516.1Genomic Context describing neighboring genes Neighboring gene MSL complex subunit 3 Neighboring gene glycogen synthase kinase-3 alpha pseudogene Neighboring gene Rho GTPase activating protein 6 Neighboring gene cytochrome c-type heme lyase Neighboring gene fatty aldehyde dehydrogenase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amelogenin, X isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001285616.1 → NP_001272545.1  amelogenin, X isoform precursor

    See identical proteins and their annotated locations for NP_001272545.1

    Status: PROVISIONAL

    Source sequence(s)
    AF215889
    UniProtKB/TrEMBL
    Q9GJV6
    Related
    ENSCHIP00000017739.2, ENSCHIT00000025551.2
    Conserved Domains (1) summary
    smart00818
    Location:28 → 207
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth

RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NW_017189516.1 Reference ASM170441v1 Primary Assembly

    Range
    58861148..58868852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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