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AATF apoptosis antagonizing transcription factor [ Canis lupus familiaris (dog) ]

Gene ID: 100856664, updated on 8-Mar-2024

Summary

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Official Symbol
AATFprovided by VGNC
Official Full Name
apoptosis antagonizing transcription factorprovided by VGNC
Primary source
VGNC:VGNC:37420
See related
Ensembl:ENSCAFG00845006720
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See AATF in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (37583095..37693391)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (35998704..36107988)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (36739791..36849296)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (36364898..36474825)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (36652569..36762368)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097546 Neighboring gene U2 spliceosomal RNA Neighboring gene LIM homeobox 1 Neighboring gene U4 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene acetyl-CoA carboxylase alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein AATF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    37583095..37693391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677242.1 → XP_038533170.1  protein AATF isoform X1

    UniProtKB/TrEMBL
    A0A8C0PZT3
    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  2. XM_038677243.1 → XP_038533171.1  protein AATF isoform X2

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  3. XM_038677248.1 → XP_038533176.1  protein AATF isoform X7

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  4. XM_038677245.1 → XP_038533173.1  protein AATF isoform X4

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  5. XM_038677247.1 → XP_038533175.1  protein AATF isoform X6

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 547
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  6. XM_038677246.1 → XP_038533174.1  protein AATF isoform X5

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  7. XM_038677249.1 → XP_038533177.1  protein AATF isoform X8

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  8. XM_038677244.1 → XP_038533172.1  protein AATF isoform X3

    UniProtKB/TrEMBL
    A0A8C0JPR9, A0A8C0Q0L4, A0A8I3N0N4
    Related
    ENSCAFP00845009302.1, ENSCAFT00845011923.1
    Conserved Domains (3) summary
    pfam08164
    Location:469 → 553
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    36364898..36474825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486210.1 → XP_038342138.1  protein AATF isoform X1

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  2. XM_038486211.1 → XP_038342139.1  protein AATF isoform X2

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  3. XM_038486216.1 → XP_038342144.1  protein AATF isoform X7

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  4. XM_038486213.1 → XP_038342141.1  protein AATF isoform X4

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  5. XM_038486215.1 → XP_038342143.1  protein AATF isoform X6

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 547
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  6. XM_038486214.1 → XP_038342142.1  protein AATF isoform X5

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  7. XM_038486217.1 → XP_038342145.1  protein AATF isoform X8

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  8. XM_038486212.1 → XP_038342140.1  protein AATF isoform X3

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 553
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    36652569..36762368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038611996.1 → XP_038467924.1  protein AATF isoform X1

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  2. XM_038611997.1 → XP_038467925.1  protein AATF isoform X2

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  3. XM_038612002.1 → XP_038467930.1  protein AATF isoform X7

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  4. XM_038611999.1 → XP_038467927.1  protein AATF isoform X4

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  5. XM_038612001.1 → XP_038467929.1  protein AATF isoform X6

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 547
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  6. XM_038612000.1 → XP_038467928.1  protein AATF isoform X5

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  7. XM_038612003.1 → XP_038467931.1  protein AATF isoform X8

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  8. XM_038611998.1 → XP_038467926.1  protein AATF isoform X3

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 553
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    36739791..36849296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548028.1 → XP_038403956.1  protein AATF isoform X1

  2. XM_038548029.1 → XP_038403957.1  protein AATF isoform X2

  3. XM_038548034.1 → XP_038403962.1  protein AATF isoform X7

  4. XM_038548030.1 → XP_038403958.1  protein AATF isoform X3

  5. XM_038548031.1 → XP_038403959.1  protein AATF isoform X4

  6. XM_038548033.1 → XP_038403961.1  protein AATF isoform X6

  7. XM_038548032.1 → XP_038403960.1  protein AATF isoform X5

  8. XM_038548035.1 → XP_038403963.1  protein AATF isoform X8

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    35998704..36107988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022423272.2 → XP_022278980.1  protein AATF isoform X1

    UniProtKB/TrEMBL
    A0A8C0PZT3
    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  2. XM_022423273.2 → XP_022278981.1  protein AATF isoform X2

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  3. XM_038608869.1 → XP_038464797.1  protein AATF isoform X7

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  4. XM_003639300.5 → XP_003639348.2  protein AATF isoform X4

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  5. XM_022423277.2 → XP_022278985.1  protein AATF isoform X6

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 547
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  6. XM_022423275.2 → XP_022278983.1  protein AATF isoform X5

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 544
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  7. XM_038608876.1 → XP_038464804.1  protein AATF isoform X8

    Conserved Domains (3) summary
    pfam08164
    Location:469 → 545
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB

  8. XM_022423274.2 → XP_022278982.1  protein AATF isoform X3

    UniProtKB/TrEMBL
    A0A8C0JPR9, A0A8C0Q0L4, A0A8I3N0N4
    Conserved Domains (3) summary
    pfam08164
    Location:469 → 553
    TRAUB; Apoptosis-antagonizing transcription factor, C-terminal
    pfam13339
    Location:227 → 378
    AATF-Che1; Apoptosis antagonizing transcription factor
    NF033845
    Location:19 → 234
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
Nucleotide Protein
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