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Afp alpha fetoprotein [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768980, updated on 8-Mar-2024

Summary

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Gene symbol
Afp
Gene description
alpha fetoprotein
Locus tag
I79_025221
See related
Ensembl:ENSCGRG00015010257
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003618595.1 (14741..33237)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (155253730..155272253)

NW_003618595.1Genomic Context describing neighboring genes Neighboring gene albumin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-fetoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003618595.1 Reference CriGri_1.0 Primary Assembly

    Range
    14741..33237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515588.5 → XP_003515636.4  alpha-fetoprotein

    UniProtKB/TrEMBL
    A0A061INL0, A0A9J7EVM8
    Conserved Domains (2) summary
    smart00103
    Location:404 → 594
    ALBUMIN; serum albumin
    cd00015
    Location:33 → 209
    ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    155253730..155272253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027388370.2 → XP_027244171.2  alpha-fetoprotein

    UniProtKB/TrEMBL
    A0A061INL0, A0A9J7EVM8
    Related
    ENSCGRP00015013379.2, ENSCGRT00015016365.2
    Conserved Domains (2) summary
    smart00103
    Location:404 → 594
    ALBUMIN; serum albumin
    cd00015
    Location:33 → 209
    ALBUMIN; Albumin domain, contains five or six internal disulphide bonds; albuminoid superfamily includes alpha-fetoprotein which binds various cations, fatty acids and bilirubin; vitamin D-binding protein which binds to vitamin D, its metabolites, and fatty acids; ...
Nucleotide Protein Strain
Heading Accession and Version

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