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ABCD3 ATP binding cassette subfamily D member 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 100615571, updated on 11-Apr-2024

Summary

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Official Symbol
ABCD3provided by VGNC
Official Full Name
ATP binding cassette subfamily D member 3provided by VGNC
Primary source
VGNC:VGNC:23
Locus tag
CK820_G0020699
See related
Ensembl:ENSPTRG00000000976
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (136660842..136761385, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (94537900..94638441)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107967405 Neighboring gene coagulation factor III, tissue factor Neighboring gene uncharacterized LOC107967393 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 3
Names
ATP-binding cassette, sub-family D (ALD), member 3
ATP-binding cassette, sub-family D, member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    136660842..136761385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016922715.3 → XP_016778204.1  ATP-binding cassette sub-family D member 3 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TLF1, A0A2J8MHH8, A0A6D2XXU9, K7D6R7
    Related
    ENSPTRP00000066177.1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 647
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_016922737.3 → XP_016778226.1  ATP-binding cassette sub-family D member 3 isoform X4

    UniProtKB/TrEMBL
    A0A2I3TLF1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 574
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_016922704.3 → XP_016778193.1  ATP-binding cassette sub-family D member 3 isoform X5

    UniProtKB/TrEMBL
    A0A2I3TLF1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 671
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_016922712.3 → XP_016778201.1  ATP-binding cassette sub-family D member 3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TLF1
    Related
    ENSPTRP00000090065.1

  5. XM_016922719.4 → XP_016778208.1  ATP-binding cassette sub-family D member 3 isoform X3

    UniProtKB/TrEMBL
    A0A2I3TLF1
    Conserved Domains (3) summary
    cd03223
    Location:409 → 614
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    TIGR00954
    Location:7 → 616
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    pfam06472
    Location:28 → 307
    ABC_membrane_2; ABC transporter transmembrane region 2

  6. XM_063799475.1 → XP_063655545.1  ATP-binding cassette sub-family D member 3 isoform X4

  7. XM_016922733.4 → XP_016778222.1  ATP-binding cassette sub-family D member 3 isoform X4

    UniProtKB/TrEMBL
    A0A2I3TLF1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 574
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  8. XM_016922748.3 → XP_016778237.1  ATP-binding cassette sub-family D member 3 isoform X6

    UniProtKB/TrEMBL
    A0A2J8MHG6, A0A6D2XAB7, K7DBG1
    Related
    ENSPTRP00000085397.1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 234
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
Nucleotide Protein
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