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ALG9 ALG9 alpha-1,2-mannosyltransferase [ Pan troglodytes (chimpanzee) ]

Gene ID: 100614079, updated on 29-Mar-2024

Summary

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Official Symbol
ALG9provided by VGNC
Official Full Name
ALG9 alpha-1,2-mannosyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:108882
Locus tag
CK820_G0034399
See related
Ensembl:ENSPTRG00000004271
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (113758912..113860830, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (112973733..113083011, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene salt inducible kinase 2 Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene protein phosphatase 2 scaffold subunit Abeta Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 Neighboring gene putative ribosomal protein eL43-like Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene cilia and flagella associated protein 68

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9
Names
asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog
NP_001267320.1
XP_016775233.2
XP_016775234.2
XP_016775235.2
XP_063638487.1
XP_063638488.1
XP_063638489.1
XP_063638490.1
XP_063638491.1
XP_063638492.1
XP_063638493.1
XP_063638494.1
XP_063638495.1
XP_063638496.1
XP_063638497.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280391.1 → NP_001267320.1  alpha-1,2-mannosyltransferase ALG9

    See identical proteins and their annotated locations for NP_001267320.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306443
    UniProtKB/TrEMBL
    A0A2J8L0D9, G2HI79
    Related
    ENSPTRP00000091031.1, ENSPTRT00000105278.1
    Conserved Domains (1) summary
    pfam03901
    Location:60 → 489
    Glyco_transf_22; Alg9-like mannosyltransferase family

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    113758912..113860830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016919745.4 → XP_016775234.2  alpha-1,2-mannosyltransferase ALG9 isoform X2

    UniProtKB/TrEMBL
    A0A2J8L0E1
    Conserved Domains (1) summary
    pfam03901
    Location:60 → 482
    Glyco_transf_22; Alg9-like mannosyltransferase family

  2. XM_016919744.4 → XP_016775233.2  alpha-1,2-mannosyltransferase ALG9 isoform X1

    UniProtKB/TrEMBL
    A0A2J8L0D9
    Conserved Domains (1) summary
    pfam03901
    Location:60 → 489
    Glyco_transf_22; Alg9-like mannosyltransferase family

  3. XM_063782427.1 → XP_063638497.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  4. XM_063782420.1 → XP_063638490.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  5. XM_063782426.1 → XP_063638496.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  6. XM_063782424.1 → XP_063638494.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  7. XM_063782421.1 → XP_063638491.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  8. XM_063782419.1 → XP_063638489.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  9. XM_063782423.1 → XP_063638493.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  10. XM_063782422.1 → XP_063638492.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  11. XM_063782418.1 → XP_063638488.1  alpha-1,2-mannosyltransferase ALG9 isoform X5

  12. XM_063782425.1 → XP_063638495.1  alpha-1,2-mannosyltransferase ALG9 isoform X6

  13. XM_063782417.1 → XP_063638487.1  alpha-1,2-mannosyltransferase ALG9 isoform X4

  14. XM_016919746.4 → XP_016775235.2  alpha-1,2-mannosyltransferase ALG9 isoform X3

    UniProtKB/TrEMBL
    A0A2J8L0D9
    Conserved Domains (1) summary
    pfam03901
    Location:60 → 489
    Glyco_transf_22; Alg9-like mannosyltransferase family

RNA

  1. XR_010147081.1 RNA Sequence

  2. XR_010147083.1 RNA Sequence

  3. XR_010147082.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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