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CAST calpastatin [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100600776, updated on 8-Mar-2024

Summary

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Gene symbol
CAST
Gene description
calpastatin
See related
EnsemblRapid:ENSNLEG00000014144
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
33
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 2 NC_044382.1 (105215891..105334446)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 2 NC_019817.1 (110907626..111031406)

Chromosome 2 - NC_044382.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 pseudogene Neighboring gene endoplasmic reticulum aminopeptidase 1 Neighboring gene endoplasmic reticulum aminopeptidase 2 Neighboring gene uncharacterized LOC101178172

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inhibition of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpastatin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044382.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    105215891..105334446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030817123.1 → XP_030672983.1  calpastatin isoform X3

    UniProtKB/TrEMBL
    A0A2I3GBK1
    Related
    ENSNLEP00000049224.2, ENSNLET00000055331.2

  2. XM_030817109.1 → XP_030672969.1  calpastatin isoform X1

    UniProtKB/TrEMBL
    A0A2I3GBK1, G1RW16
    Related
    ENSNLEP00000017443.1, ENSNLET00000018312.3
    Conserved Domains (1) summary
    pfam00748
    Location:453 → 583
    Calpain_inhib; Calpain inhibitor

  3. XM_030817114.1 → XP_030672974.1  calpastatin isoform X2

    UniProtKB/TrEMBL
    A0A2I3GBK1
    Conserved Domains (1) summary
    pfam00748
    Location:434 → 564
    Calpain_inhib; Calpain inhibitor

  4. XM_003277189.4 → XP_003277237.1  calpastatin isoform X4

    UniProtKB/TrEMBL
    A0A2I3GBK1, A0A2I3GGL8
    Conserved Domains (1) summary
    pfam00748
    Location:412 → 542
    Calpain_inhib; Calpain inhibitor

  5. XM_030817141.1 → XP_030673001.1  calpastatin isoform X5

    UniProtKB/TrEMBL
    A0A2I3GBK1

  6. XM_003277188.4 → XP_003277236.1  calpastatin isoform X8

    UniProtKB/TrEMBL
    A0A2I3HDR3
    Related
    ENSNLEP00000030441.2, ENSNLET00000043824.2
    Conserved Domains (1) summary
    pfam00748
    Location:348 → 478
    Calpain_inhib; Calpain inhibitor

  7. XM_004087414.3 → XP_004087462.1  calpastatin isoform X12

    UniProtKB/TrEMBL
    A0A2I3GRS9, A0A2I3HDR3
    Related
    ENSNLEP00000039223.2, ENSNLET00000058251.2
    Conserved Domains (1) summary
    pfam00748
    Location:298 → 428
    Calpain_inhib; Calpain inhibitor

  8. XM_030817148.1 → XP_030673008.1  calpastatin isoform X6

    UniProtKB/TrEMBL
    A0A2I3HA79
    Related
    ENSNLEP00000054486.1, ENSNLET00000077910.1
    Conserved Domains (1) summary
    pfam00748
    Location:370 → 500
    Calpain_inhib; Calpain inhibitor

  9. XM_030817157.1 → XP_030673017.1  calpastatin isoform X7

    UniProtKB/TrEMBL
    A0A2I3HA79, A0A2I3HDR3
    Related
    ENSNLEP00000041793.2, ENSNLET00000038235.2
    Conserved Domains (1) summary
    pfam00748
    Location:351 → 481
    Calpain_inhib; Calpain inhibitor

  10. XM_030817169.1 → XP_030673029.1  calpastatin isoform X9

    UniProtKB/TrEMBL
    A0A2I3HDR3

  11. XM_030817172.1 → XP_030673032.1  calpastatin isoform X10

    UniProtKB/TrEMBL
    A0A2I3HDR3
    Conserved Domains (1) summary
    pfam00748
    Location:329 → 459
    Calpain_inhib; Calpain inhibitor

  12. XM_012505394.2 → XP_012360848.1  calpastatin isoform X11

    UniProtKB/TrEMBL
    A0A2I3HDR3
    Related
    ENSNLEP00000034041.2, ENSNLET00000052043.2
    Conserved Domains (1) summary
    pfam00748
    Location:329 → 459
    Calpain_inhib; Calpain inhibitor
Nucleotide Protein
Heading Accession and Version

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