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atp5l ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [ Ictalurus punctatus (channel catfish) ]

Gene ID: 100528741, updated on 8-Mar-2024

Summary

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Gene symbol
atp5l
Gene description
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
See related
Ensembl:ENSIPUG00000008651
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
atp5mg
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 28
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 28 NC_030443.2 (10451260..10455362, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 28 NC_030443.1 (9033594..9037516, complement)

Chromosome 28 - NC_030443.2Genomic Context describing neighboring genes Neighboring gene finTRIM family, member 82 Neighboring gene intraflagellar transport 22 homolog (Chlamydomonas) Neighboring gene NHERF family PDZ scaffold protein 4b Neighboring gene ATP-binding cassette subfamily G member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit g, mitochondrial
Names
ATP synthase membrane subunit g
ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
mitochondrial ATP synthase subunit g
NP_001187940.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001201011.1 → NP_001187940.1  ATP synthase subunit g, mitochondrial

    See identical proteins and their annotated locations for NP_001187940.1

    Status: PROVISIONAL

    Source sequence(s)
    GU589383
    UniProtKB/TrEMBL
    E3TG97
    Related
    ENSIPUP00000012698.1, ENSIPUT00000013232.1
    Conserved Domains (1) summary
    pfam04718
    Location:16 → 89
    ATP-synt_G; Mitochondrial ATP synthase g subunit

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030443.2 Reference Coco_2.0 Primary Assembly

    Range
    10451260..10455362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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