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as3mt arsenite methyltransferase [ Ictalurus punctatus (channel catfish) ]

Gene ID: 100528174, updated on 2-May-2024

Summary

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Gene symbol
as3mt
Gene description
arsenite methyltransferase
See related
Ensembl:ENSIPUG00000022683
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 26
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 26 NC_030441.2 (15008081..15018639, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 26 NC_030441.1 (13768903..13779461, complement)

Chromosome 26 - NC_030441.2Genomic Context describing neighboring genes Neighboring gene 5'-nucleotidase, cytosolic IIb Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 2b Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene WW domain binding protein 1-like b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arsenite methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arsonoacetate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toxin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arsenite methyltransferase
Names
arsenic (+3 oxidation state) methyltransferase
NP_001187373.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001200444.1 → NP_001187373.1  arsenite methyltransferase

    See identical proteins and their annotated locations for NP_001187373.1

    Status: PROVISIONAL

    Source sequence(s)
    GU588604
    UniProtKB/TrEMBL
    E3TE24
    Related
    ENSIPUP00000033744.1, ENSIPUT00000035069.1
    Conserved Domains (2) summary
    PRK11873
    Location:13 → 272
    arsM; arsenite S-adenosylmethyltransferase; Reviewed
    pfam13847
    Location:77 → 189
    Methyltransf_31; Methyltransferase domain

RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030441.2 Reference Coco_2.0 Primary Assembly

    Range
    15008081..15018639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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