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ASNSD1 asparagine synthetase domain containing 1 [ Sus scrofa (pig) ]

Gene ID: 100513955, updated on 8-Mar-2024

Summary

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Official Symbol
ASNSD1provided by VGNC
Official Full Name
asparagine synthetase domain containing 1provided by VGNC
Primary source
VGNC:VGNC:108506
See related
Ensembl:ENSSSCG00000016041
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in psoas major muscle (RPKM 10.1), ovary (RPKM 8.9) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (94261910..94272129)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (105299188..105309291)

Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene solute carrier family 40 member 1 Neighboring gene protein FAM91A1-like Neighboring gene ankyrin and armadillo repeat containing Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene ORMDL sphingolipid biosynthesis regulator 1 Neighboring gene PMS1 homolog 1, mismatch repair system component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparagine synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in asparagine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asparagine synthetase domain-containing protein 1
Names
asparagine synthetase domain-containing protein 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

    Range
    94261910..94272129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003133541.6 → XP_003133589.2  asparagine synthetase domain-containing protein 1

    See identical proteins and their annotated locations for XP_003133589.2

    UniProtKB/TrEMBL
    A0A4X1TKN4, A0A4X1TNN8, A0A8D1QHP5, F1RXV0
    Conserved Domains (2) summary
    cd01991
    Location:287 → 606
    Asn_Synthase_B_C; The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the ...
    cd03766
    Location:1 → 179
    Gn_AT_II_novel; Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, ...

  2. XM_005672020.3 → XP_005672077.1  asparagine synthetase domain-containing protein 1

    See identical proteins and their annotated locations for XP_005672077.1

    UniProtKB/TrEMBL
    A0A4X1TKN4, A0A4X1TNN8, A0A8D1QHP5, F1RXV0
    Related
    ENSSSCP00000016996.2, ENSSSCT00000017466.5
    Conserved Domains (2) summary
    cd01991
    Location:287 → 606
    Asn_Synthase_B_C; The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the ...
    cd03766
    Location:1 → 179
    Gn_AT_II_novel; Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, ...
Nucleotide Protein
Heading Accession and Version

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