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atp11c ATPase, class VI, type 11C [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100498300, updated on 25-Apr-2024

Summary

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Official Symbol
atp11cprovided by Xenbase
Official Full Name
ATPase, class VI, type 11Cprovided by Xenbase
Primary source
Xenbase:XB-GENE-976439
See related
Ensembl:ENSXETG00000018290
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
32
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (70037358..70117133, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (48936612..49017335, complement)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene coagulation factor 9 Neighboring gene MCF.2 cell line derived transforming sequence Neighboring gene uncharacterized LOC116406941 Neighboring gene Rho GTPase activating protein 35

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phospholipid transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipid-transporting ATPase IG
Names
probable phospholipid-transporting ATPase 11C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    70037358..70117133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012969232.3 → XP_012824686.2  phospholipid-transporting ATPase IG isoform X1

    UniProtKB/TrEMBL
    A0A6I8RTK2, A0A8J0R6E9
    Related
    ENSXETP00000086069.2, ENSXETT00000080760.2
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  2. XM_031891896.1 → XP_031747756.1  phospholipid-transporting ATPase IG isoform X1

    UniProtKB/TrEMBL
    A0A6I8RTK2, A0A8J0R6E9
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  3. XM_002932596.5 → XP_002932642.3  phospholipid-transporting ATPase IG isoform X3

    UniProtKB/TrEMBL
    A0A6I8S9Y8, A0A8J0QI37
    Related
    ENSXETP00000094261.2, ENSXETT00000085189.2
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  4. XM_004916948.4 → XP_004917005.2  phospholipid-transporting ATPase IG isoform X1

    UniProtKB/TrEMBL
    A0A6I8RTK2, A0A8J0R6E9
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  5. XM_012969233.3 → XP_012824687.2  phospholipid-transporting ATPase IG isoform X2

    UniProtKB/TrEMBL
    A0A6I8RMX9, A0A6I8S4N8
    Related
    ENSXETP00000086188.2, ENSXETT00000066779.2
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  6. XM_004916950.4 → XP_004917007.2  phospholipid-transporting ATPase IG isoform X5

    UniProtKB/TrEMBL
    A0A6I8S4N8, A0A8J0R3Y9
    Related
    ENSXETP00000080040.2, ENSXETT00000100982.2
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  7. XM_004916949.4 → XP_004917006.2  phospholipid-transporting ATPase IG isoform X4

    UniProtKB/TrEMBL
    A0A6I8S4N8, A0A6I8SJG8
    Related
    ENSXETP00000098437.2, ENSXETT00000073658.2
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling

  8. XM_031891897.1 → XP_031747757.1  phospholipid-transporting ATPase IG isoform X5

    UniProtKB/TrEMBL
    A0A6I8S4N8, A0A8J0R3Y9
    Conserved Domains (2) summary
    cd02073
    Location:42 → 971
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
    pfam07695
    Location:954 → 1071
    7TMR-DISM_7TM; 7TM diverse intracellular signalling
Nucleotide Protein Strain
Heading Accession and Version

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