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pgghg protein-glucosylgalactosylhydroxylysine glucosidase [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100496278, updated on 8-Mar-2024

Summary

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Official Symbol
pgghgprovided by Xenbase
Official Full Name
protein-glucosylgalactosylhydroxylysine glucosidaseprovided by Xenbase
Primary source
Xenbase:XB-GENE-6045820
See related
Ensembl:ENSXETG00000020609
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
athl1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (37590751..37604803)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (37953071..37967409, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene USP6 N-terminal-like protein 2 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene cathepsin W Neighboring gene cathepsin W

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein-glucosylgalactosylhydroxylysine glucosidase
Names
ATH1, acid trehalase-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    37590751..37604803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002939332.5 → XP_002939378.3  protein-glucosylgalactosylhydroxylysine glucosidase

    UniProtKB/TrEMBL
    A0A6I8RFB3, A0A6I8RPX9
    Related
    ENSXETP00000082658.2, ENSXETT00000069548.2
    Conserved Domains (1) summary
    COG1554
    Location:35 → 665
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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