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angptl5 angiopoietin like 5 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493165, updated on 8-Mar-2024

Summary

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Official Symbol
angptl5provided by Xenbase
Official Full Name
angiopoietin like 5provided by Xenbase
Primary source
Xenbase:XB-GENE-479274
See related
Ensembl:ENSXETG00000005480
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (162422852..162432196)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (159200571..159225058)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 300 Neighboring gene centrosomal protein 126 Neighboring gene transient receptor potential cation channel, subfamily C, member 6 Neighboring gene progesterone receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
angiopoietin-related protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    162422852..162432196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031896374.1 → XP_031752234.1  angiopoietin-related protein 5

    UniProtKB/TrEMBL
    A0A8J1J309, F6V4B5
    Related
    ENSXETP00000012044.5, ENSXETT00000012044.5
    Conserved Domains (1) summary
    cd00087
    Location:108 → 340
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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