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atp8b3 ATPase, aminophospholipid transporter, class I, type 8B, member 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100490666, updated on 25-Apr-2024

Summary

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Official Symbol
atp8b3provided by Xenbase
Official Full Name
ATPase, aminophospholipid transporter, class I, type 8B, member 3provided by Xenbase
Primary source
Xenbase:XB-GENE-992174
See related
Ensembl:ENSXETG00000008135
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
atpik
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
27
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (98356705..98409555)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (79410604..79438362)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 17A Neighboring gene REX1, RNA exonuclease 1 homolog Neighboring gene U4 spliceosomal RNA Neighboring gene one cut homeobox 3 Neighboring gene transcription factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phospholipid transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipid-transporting ATPase IK

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    98356705..98409555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904569.1 → XP_031760429.1  phospholipid-transporting ATPase IK

    UniProtKB/TrEMBL
    F6UXA7
    Related
    ENSXETP00000017864.5, ENSXETT00000017864.5
    Conserved Domains (1) summary
    cd02073
    Location:50 → 999
    P-type_ATPase_APLT_Dnf-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2, -10D, -11B, -11C
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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