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acss1 acyl-CoA synthetase short chain family member 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485894, updated on 25-Apr-2024

Summary

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Official Symbol
acss1provided by Xenbase
Official Full Name
acyl-CoA synthetase short chain family member 1provided by Xenbase
Primary source
Xenbase:XB-GENE-990112
See related
Ensembl:ENSXETG00000012777
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
acas2l; acecs1; acecs2l
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (39054646..39117766, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (49228626..49289247, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene phosphorylase, glycogen, muscle Neighboring gene BANF family member 2 Neighboring gene visual system homeobox 1 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 6 (putative)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables propionate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acetyl-coenzyme A synthetase 2-like, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    39054646..39117766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002937453.5 → XP_002937499.1  acetyl-coenzyme A synthetase 2-like, mitochondrial

    UniProtKB/TrEMBL
    A0A6I8SCC7, A0A6I8T008
    Related
    ENSXETP00000099361.1, ENSXETT00000074090.2
    Conserved Domains (1) summary
    cd05966
    Location:72 → 683
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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