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PIGA phosphatidylinositol glycan anchor biosynthesis class A [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100483140, updated on 8-Mar-2024

Summary

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Gene symbol
PIGA
Gene description
phosphatidylinositol glycan anchor biosynthesis class A
Locus tag
PANDA_019079
See related
Ensembl:ENSAMEG00000017109
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PIGA in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (12228088..12241049, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218927.1 (157845..170503)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 9 Neighboring gene ankyrin repeat and SOCS box containing 11 Neighboring gene vascular endothelial growth factor D Neighboring gene pirin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    12228088..12241049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002928961.4 → XP_002929007.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A

    See identical proteins and their annotated locations for XP_002929007.1

    UniProtKB/TrEMBL
    D2I1C3, G1MFE3
    Related
    ENSAMEP00000018073.2, ENSAMET00000018804.2
    Conserved Domains (2) summary
    cd03796
    Location:34 → 430
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
    COG0438
    Location:34 → 405
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]

  2. XM_034649388.1 → XP_034505279.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A

    UniProtKB/TrEMBL
    D2I1C3, G1MFE3

  3. XM_034649387.1 → XP_034505278.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A

    UniProtKB/TrEMBL
    D2I1C3, G1MFE3
Nucleotide Protein
Heading Accession and Version

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