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ASB11 ankyrin repeat and SOCS box containing 11 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482467, updated on 8-Mar-2024

Summary

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Gene symbol
ASB11
Gene description
ankyrin repeat and SOCS box containing 11
Locus tag
PANDA_019080
See related
Ensembl:ENSAMEG00000017112
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (12197584..12227323, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218927.1 (173051..197709)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene beta-hexosaminidase subunit beta-like Neighboring gene ankyrin repeat and SOCS box containing 9 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class A Neighboring gene vascular endothelial growth factor D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    12197584..12227323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002928958.4 → XP_002929004.1  ankyrin repeat and SOCS box protein 11 isoform X1

    See identical proteins and their annotated locations for XP_002929004.1

    UniProtKB/TrEMBL
    D2I1C4
    Related
    ENSAMEP00000031581.1, ENSAMET00000047343.1
    Conserved Domains (5) summary
    cd00204
    Location:66 → 183
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:102 → 192
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:66 → 118
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:66 → 95
    ANK; ANK repeat [structural motif]
    cl02533
    Location:282 → 323
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...

  2. XM_034649798.1 → XP_034505689.1  ankyrin repeat and SOCS box protein 11 isoform X2

    UniProtKB/TrEMBL
    G1MFF4
    Related
    ENSAMEP00000018084.2, ENSAMET00000018815.2
Nucleotide Protein
Heading Accession and Version

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