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ALPK2 alpha kinase 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100477842, updated on 8-Mar-2024

Summary

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Gene symbol
ALPK2
Gene description
alpha kinase 2
Locus tag
PANDA_015313
See related
Ensembl:ENSAMEG00000015212
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See ALPK2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
18
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 14 NC_048231.1 (89714632..89858555, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218274.1 (214309..332374, complement)

Chromosome 14 - NC_048231.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117796021 Neighboring gene NEDD4 like E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC117796054 Neighboring gene uncharacterized LOC117796129 Neighboring gene U6 spliceosomal RNA Neighboring gene MALT1 paracaspase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-protein kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048231.1 Reference ASM200744v2 Primary Assembly

    Range
    89714632..89858555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034643335.1 → XP_034499226.1  alpha-protein kinase 2 isoform X1

    UniProtKB/TrEMBL
    D2HT59, G1M9K6

  2. XM_019806439.2 → XP_019661998.2  alpha-protein kinase 2 isoform X1

    UniProtKB/TrEMBL
    D2HT59, G1M9K6
    Related
    ENSAMEP00000016027.2, ENSAMET00000016697.2

  3. XM_019806440.2 → XP_019661999.2  alpha-protein kinase 2 isoform X2

    UniProtKB/TrEMBL
    D2HT59

  4. XM_034643336.1 → XP_034499227.1  alpha-protein kinase 2 isoform X3

    UniProtKB/TrEMBL
    D2HT59

  5. XM_034643337.1 → XP_034499228.1  alpha-protein kinase 2 isoform X4

    UniProtKB/TrEMBL
    D2HT59

  6. XM_034643338.1 → XP_034499229.1  alpha-protein kinase 2 isoform X5

    UniProtKB/TrEMBL
    D2HT59

  7. XM_019806443.2 → XP_019662002.2  alpha-protein kinase 2 isoform X6

    UniProtKB/TrEMBL
    D2HT59

RNA

  1. XR_002143966.2 RNA Sequence

  2. XR_004620508.1 RNA Sequence

  3. XR_004620507.1 RNA Sequence

  4. XR_002143967.2 RNA Sequence

Nucleotide Protein
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