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AFM afamin [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100471147, updated on 8-Mar-2024

Summary

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Gene symbol
AFM
Gene description
afamin
Locus tag
PANDA_018506
See related
Ensembl:ENSAMEG00000004847
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 11 NC_048228.1 (53297141..53319446, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218820.1 (241387..263433, complement)

Chromosome 11 - NC_048228.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 6 Neighboring gene alpha-fetoprotein Neighboring gene alpha fetoprotein Neighboring gene albumin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vitamin E binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport within extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vitamin transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
afamin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048228.1 Reference ASM200744v2 Primary Assembly

    Range
    53297141..53319446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011236370.3 → XP_011234672.1  afamin

    UniProtKB/TrEMBL
    D2I059, G1LE42
    Related
    ENSAMEP00000005176.2, ENSAMET00000005388.2
    Conserved Domains (1) summary
    pfam00273
    Location:414 → 590
    Serum_albumin; Serum albumin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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