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ATP5F1A ATP synthase F1 subunit alpha [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464901, updated on 8-Mar-2024

Summary

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Gene symbol
ATP5F1A
Gene description
ATP synthase F1 subunit alpha
Locus tag
PANDA_006569
See related
Ensembl:ENSAMEG00000012614
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
ATP5A1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 14 NC_048231.1 (79402492..79410942, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217529.1 (311504..319937, complement)

Chromosome 14 - NC_048231.1Genomic Context describing neighboring genes Neighboring gene ectopic P-granules 5 autophagy tethering factor Neighboring gene proline-serine-threonine phosphatase interacting protein 2 Neighboring gene 60S ribosomal protein L9-like Neighboring gene HAUS augmin like complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase, catalytic core IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit alpha, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048231.1 Reference ASM200744v2 Primary Assembly

    Range
    79402492..79410942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002918119.4 → XP_002918165.1  ATP synthase subunit alpha, mitochondrial

    UniProtKB/TrEMBL
    A0A7N5P0Q4, G1M1T5
    Related
    ENSAMEP00000013296.2, ENSAMET00000013853.2
    Conserved Domains (4) summary
    PRK09281
    Location:49 → 553
    PRK09281; F0F1 ATP synthase subunit alpha; Validated
    cd01132
    Location:137 → 418
    F1_ATPase_alpha; F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to ...
    pfam00306
    Location:427 → 521
    ATP-synt_ab_C; ATP synthase alpha/beta chain, C terminal domain
    pfam02874
    Location:69 → 135
    ATP-synt_ab_N; ATP synthase alpha/beta family, beta-barrel domain
Nucleotide Protein
Heading Accession and Version

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