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A4GNT alpha-1,4-N-acetylglucosaminyltransferase [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100462185, updated on 26-Mar-2024

Summary

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Gene symbol
A4GNT
Gene description
alpha-1,4-N-acetylglucosaminyltransferase
Locus tag
CR201_G0032566
See related
Ensembl:ENSPPYG00000014138
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (147615303..147624336, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (135413039..135421747, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene DAZ interacting zinc finger protein 1 like Neighboring gene debranching RNA lariats 1 Neighboring gene armadillo repeat containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    147615303..147624336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002814089.6 → XP_002814135.1  alpha-1,4-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A2J8TTQ6, A0A663DEL6, H2PBJ2
    Related
    ENSPPYP00000015816.1
    Conserved Domains (2) summary
    pfam04488
    Location:64 → 182
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:201 → 323
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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