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ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif 6 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100439086, updated on 26-Mar-2024

Summary

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Gene symbol
ADAMTS6
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 6
Locus tag
CR201_G0016171
See related
Ensembl:ENSPPYG00000015507
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 4 NC_071989.2 (74325376..74657060, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 5 NC_071990.1 (74355150..74686068, complement)

Chromosome 4 - NC_071989.2Genomic Context describing neighboring genes Neighboring gene shisa like 2B Neighboring gene SREK1 interacting protein 1 Neighboring gene uncharacterized LOC129059683 Neighboring gene CWC27 spliceosome associated cyclophilin Neighboring gene centromere protein K Neighboring gene peptidylprolyl isomerase domain and WD repeat containing 1 Neighboring gene tripartite motif containing 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071989.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    74325376..74657060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024247310.3 → XP_024103078.2  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X5

  2. XM_063724116.1 → XP_063580186.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X2

  3. XM_054556407.2 → XP_054412382.2  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1

  4. XM_063724117.1 → XP_063580187.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X3

  5. XM_024247305.3 → XP_024103073.2  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X1

  6. XM_063724118.1 → XP_063580188.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X4

  7. XM_054556414.2 → XP_054412389.2  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X8

  8. XM_063724121.1 → XP_063580191.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X8

  9. XM_063724119.1 → XP_063580189.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X6

  10. XM_063724120.1 → XP_063580190.1  A disintegrin and metalloproteinase with thrombospondin motifs 6 isoform X7

RNA

  1. XR_010139960.1 RNA Sequence

  2. XR_010139961.1 RNA Sequence

  3. XR_010139962.1 RNA Sequence

Nucleotide Protein
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