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ABCB7 ATP binding cassette subfamily B member 7 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100415470, updated on 8-Mar-2024

Summary

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Gene symbol
ABCB7
Gene description
ATP binding cassette subfamily B member 7
See related
Ensembl:ENSCJAG00000016979
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (69599782..69734888, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (71127022..71263521, complement)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene MAPK-interacting and spindle-stabilizing protein-like Neighboring gene neurite extension and migration factor Neighboring gene U4 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA57 Neighboring gene uracil phosphoribosyltransferase homolog Neighboring gene zinc finger DHHC-type palmitoyltransferase 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iron-sulfur clusters transporter ABCB7, mitochondrial
Names
ATP-binding cassette sub-family B member 7, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    69599782..69734888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008989513.4 → XP_008987761.1  iron-sulfur clusters transporter ABCB7, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_008987761.1

    UniProtKB/TrEMBL
    F7HW93, F7ICN6, U3DYY2
    Related
    ENSCJAP00000031259.2
    Conserved Domains (1) summary
    COG5265
    Location:209 → 704
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]

  2. XM_002763017.5 → XP_002763063.1  iron-sulfur clusters transporter ABCB7, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7HW93
    Related
    ENSCJAP00000031337.1
    Conserved Domains (3) summary
    cd03253
    Location:472 → 708
    ABCC_ATM1_transporter; ATP-binding cassette domain of iron-sulfur clusters transporter, subfamily C
    COG5265
    Location:210 → 705
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
    pfam00664
    Location:150 → 424
    ABC_membrane; ABC transporter transmembrane region

  3. XM_035287696.2 → XP_035143587.1  iron-sulfur clusters transporter ABCB7, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8I3X235
    Conserved Domains (1) summary
    COG5265
    Location:87 → 582
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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