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ALG6 ALG6 alpha-1,3-glucosyltransferase [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100413929, updated on 3-Apr-2024

Summary

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Gene symbol
ALG6
Gene description
ALG6 alpha-1,3-glucosyltransferase
See related
Ensembl:ENSCJAG00000016521
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 7 NC_071448.1 (97575365..97638859)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 7 NC_048389.1 (99038524..99102859)

Chromosome 7 - NC_071448.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene forkhead box D3 Neighboring gene integrin subunit beta 3 binding protein Neighboring gene protein SET-like Neighboring gene cysteine and glycine-rich protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide-lipid intermediate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase
Names
asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071448.1 Reference mCalJa1.2.pat.X

    Range
    97575365..97638859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054236367.1 → XP_054092342.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X3

  2. XM_054236368.1 → XP_054092343.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X3

  3. XM_009001381.4 → XP_008999629.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    See identical proteins and their annotated locations for XP_008999629.1

    UniProtKB/TrEMBL
    F7B8P6, U3BC09
    Related
    ENSCJAP00000030446.1
    Conserved Domains (1) summary
    pfam03155
    Location:32 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  4. XM_009001383.4 → XP_008999631.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X3

    See identical proteins and their annotated locations for XP_008999631.1

    UniProtKB/TrEMBL
    F7B8P6
    Conserved Domains (1) summary
    pfam03155
    Location:3 → 452
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  5. XM_017974807.3 → XP_017830296.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    F7B8P6, U3BC09
    Conserved Domains (1) summary
    pfam03155
    Location:32 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  6. XM_054236369.1 → XP_054092344.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X4

  7. XM_054236366.1 → XP_054092341.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

Nucleotide Protein
Heading Accession and Version

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