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ABHD12 abhydrolase domain containing 12, lysophospholipase [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409959, updated on 3-Apr-2024

Summary

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Gene symbol
ABHD12
Gene description
abhydrolase domain containing 12, lysophospholipase
See related
Ensembl:ENSCJAG00000011654
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (29925798..30008999, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (29925760..30009149, complement)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118153594 Neighboring gene glycogen phosphorylase B Neighboring gene uncharacterized LOC128932035 Neighboring gene U6 spliceosomal RNA Neighboring gene GINS complex subunit 1 Neighboring gene ninein like Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoacylglycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylserine lipase ABHD12
Names
monoacylglycerol lipase ABHD12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    29925798..30008999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002747526.6 → XP_002747572.3  lysophosphatidylserine lipase ABHD12 isoform X4

    See identical proteins and their annotated locations for XP_002747572.3

    UniProtKB/TrEMBL
    F6R0G7, U3DXP1
    Related
    ENSCJAP00000021449.2
    Conserved Domains (1) summary
    cl26327
    Location:165 → 351
    Abhydrolase_1; alpha/beta hydrolase fold

  2. XM_017972021.3 → XP_017827510.1  lysophosphatidylserine lipase ABHD12 isoform X1

    UniProtKB/TrEMBL
    F6RAE1, F6RM52

  3. XM_054255318.1 → XP_054111293.1  lysophosphatidylserine lipase ABHD12 isoform X5

  4. XM_054255321.1 → XP_054111296.1  lysophosphatidylserine lipase ABHD12 isoform X6

  5. XM_054255320.1 → XP_054111295.1  lysophosphatidylserine lipase ABHD12 isoform X6

  6. XM_054255317.1 → XP_054111292.1  lysophosphatidylserine lipase ABHD12 isoform X3

  7. XM_054255316.1 → XP_054111291.1  lysophosphatidylserine lipase ABHD12 isoform X2

  8. XM_035298525.2 → XP_035154416.1  lysophosphatidylserine lipase ABHD12 isoform X2

    UniProtKB/TrEMBL
    F6RAE1, F6RM52
    Conserved Domains (1) summary
    pfam12146
    Location:115 → 301
    Hydrolase_4; Serine aminopeptidase, S33

  9. XM_054255319.1 → XP_054111294.1  lysophosphatidylserine lipase ABHD12 isoform X5

Nucleotide Protein
Heading Accession and Version

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