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APOA2 apolipoprotein A2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100409696, updated on 8-Mar-2024

Summary

Gene symbol
APOA2
Gene description
apolipoprotein A2
See related
Ensembl:ENSCJAG00000004950
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
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Genomic context

Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 18 NC_071459.1 (14631475..14632841, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 18 NC_048400.1 (14675745..14677111, complement)

Chromosome 18 - NC_071459.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene Fc epsilon receptor Ig Neighboring gene translocase of outer mitochondrial membrane 40 like Neighboring gene nuclear receptor subfamily 1 group I member 3 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables apolipoprotein receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables high-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables high-density lipoprotein particle receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables lipase inhibitor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of chylomicron IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of spherical high-density lipoprotein particle IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of very-low-density lipoprotein particle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
apolipoprotein A-II
Names
apolipoprotein A-II preproprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071459.1 Reference mCalJa1.2.pat.X

    Range
    14631475..14632841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002760240.5XP_002760286.1  apolipoprotein A-II

    See identical proteins and their annotated locations for XP_002760286.1

    UniProtKB/TrEMBL
    A0A8I3WSM9, F7I8R0, U3CMR6
    Related
    ENSCJAP00000009036.2
    Conserved Domains (1) summary
    pfam04711
    Location:2498
    ApoA-II; Apolipoprotein A-II (ApoA-II)