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ADAMDEC1 ADAM like decysin 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100393823, updated on 8-Mar-2024

Summary

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Gene symbol
ADAMDEC1
Gene description
ADAM like decysin 1
See related
Ensembl:ENSCJAG00000020062
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (13950732..13970887, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (14034041..14054226, complement)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128929414 Neighboring gene ADAM metallopeptidase domain 7 Neighboring gene uncharacterized LOC103787459 Neighboring gene ADAM metallopeptidase domain 28 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAM DEC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    13950732..13970887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003734575.5 → XP_003734623.3  ADAM DEC1 isoform X1

    UniProtKB/TrEMBL
    F7B0D3
    Conserved Domains (3) summary
    pfam01421
    Location:219 → 414
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:43 → 173
    Pep_M12B_propep; Reprolysin family propeptide
    cl10507
    Location:431 → 462
    Disintegrin

  2. XM_054243738.1 → XP_054099713.1  ADAM DEC1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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