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ALPK2 alpha kinase 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100388981, updated on 8-Mar-2024

Summary

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Gene symbol
ALPK2
Gene description
alpha kinase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ALPK2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (96523849..96662236, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (97628088..97766678, complement)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene NEDD4 like E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC128929490 Neighboring gene uncharacterized LOC100894899 Neighboring gene uncharacterized LOC128929491 Neighboring gene uncharacterized LOC118146910 Neighboring gene MALT1 paracaspase Neighboring gene 40S ribosomal protein S20-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-protein kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    96523849..96662236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035271217.2 → XP_035127108.2  alpha-protein kinase 2 isoform X1

    UniProtKB/TrEMBL
    F7F4D3

  2. XM_054244261.1 → XP_054100236.1  alpha-protein kinase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8I3VX87

  3. XM_035271220.2 → XP_035127111.2  alpha-protein kinase 2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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