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AAMP angio associated migratory cell protein [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100387844, updated on 8-Mar-2024

Summary

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Gene symbol
AAMP
Gene description
angio associated migratory cell protein
See related
Ensembl:ENSCJAG00000010793
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (136491879..136497804, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (137715494..137721402, complement)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene actin related protein 2/3 complex subunit 2 Neighboring gene G protein-coupled bile acid receptor 1 Neighboring gene PNKD metallo-beta-lactamase domain containing Neighboring gene transmembrane BAX inhibitor motif containing 1 Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
angio-associated migratory cell protein
Names
angio-associated migratory cell-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    136491879..136497804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008999473.3 → XP_008997721.1  angio-associated migratory cell protein isoform X2

    See identical proteins and their annotated locations for XP_008997721.1

    UniProtKB/TrEMBL
    A0A2R8MIP2, F6Z9A4, U3EZQ2
    Conserved Domains (3) summary
    smart00320
    Location:389 → 427
    WD40; WD40 repeats
    cd00200
    Location:86 → 386
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:137 → 172
    7WD40; WD40 repeat [structural motif]

  2. XM_008999472.4 → XP_008997720.1  angio-associated migratory cell protein isoform X1

    UniProtKB/TrEMBL
    A0A2R8MIP2
    Related
    ENSCJAP00000019927.2
    Conserved Domains (4) summary
    smart00320
    Location:390 → 428
    WD40; WD40 repeats
    COG2319
    Location:90 → 431
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:87 → 387
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:138 → 173
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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